#NEXUS begin data; dimensions ntax=112 nchar=173; format gap=- missing=? equate= "N=- ?=-" datatype=dna; matrix [Basidiomycota] Agaricus_bisporus CAACTTTCAGCAACGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCATCTTGCG-CT----CC--TTGG-TATTCC-GAGGAGCATGCCTGTTTGAGTGTCATTA Amanita_muscaria CAACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGANTCTTNGANCGCACNTTGGC-CT----CC--TTGG-TATTCC-GAGGAGCATGCCTGTTTGAGTGTCATTA Suillus_cavipes CAACTTTCAGCAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATC-GC-GATATGTAA-TGTGAATTGCAGAT-CTACAGTGAATCATCGAATCTTTGAACGCACCTTGCG-CT----CC--TCGG-TGTTCC-GAGGAGCATGCCTGTTTGAGTGTCAGTA Cronartium_coleosporioides TAACTTTTAACAATGGATC-TCTTGGCTCTCACATCGATGAAGAACACAGTGAAAT-GT-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCAAATCTTTGAACGCACCTTGCA-CC----TT--TTGG-TATTCC-AAAAGGTACACCTGTTTGAGTGTCATGA Puccinia_striiformis TAACTTTTAACAATGGATC-TCTAGGCTCTCACATCGATGAAGAACACAGTGAAAT-GT-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACCTTGCG-CC----TT--TTGG-TATTCC-AAAAGGCACACCTGTTTGAGTGTCATGA Melampsora_lini TAACTTTCAGCAATGGATC-TCTAGGCTCTCACGTCGATGAAGAACACAGTGAAAT-GT-GATACGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACCTTGCA-CC----TT--TTGGTTATTCC-GAGAGGTACACCTGTTTGAATGTCACGA Pucciniastrum_goeppertianum TAACTTTTAACAATGGATC-TCTTGGCTCTCACATCGATGAAGAACACAGTGAAAT-GT-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACCTTGCA-CC----TT--TTGG-TACTCC-AAAAGGTACACCTGTTTGAGTGTCATGA Chrysomyxa_arctostaphyli TAACTTTTAACAATGGATC-TCTTGGCTCTCACATCGATGAAGAACACAGTGAAAT-GT-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCAAATCTTTGAACGCACCTTGCA-CC----TT--TTGGATATTCC-GAAAG-TACACCTGTTTGAGTGTCATGA Puccinia_sorghi TAACTTTTAACAATGGATC-TCTAGGCTCTCACATCGATGAAGAACACAGTGAAAT-GT-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCATCTTGCG-CC----TT--TTGG-TATTCC-AAAAGGCACACCTGTTTGAGTGTCATGA Uromyces_scillarum TAACTTTTAACAATGGATC-TCTAGGCTCTCACATCGATGAAGAACACAGTGAAAT-GT-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATTGAATCTTTGAACGCATCTTGCG-CC----TT--TTGG-TATTCC-AAAAGGCACACCTGTTTGAGTGTCATGA Septobasidium_carestianum AAACTTTCAACAACGGATC-TCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACCTTGCA-CC----TC--TTGG-TATTCC-GAGAGGTACATCTGTTTGAGTGTCATGA Rhizopogon_subcaerulescens CAACTTTCAGCAACGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAA-GC-GATATGTAA-TGTGAATTGCAGAT-CTACAGTGAATCATCGAATCTTTGAACGCACCTTGCG-CT----CC--TCGG-TGTTCC-GAGGAGCATGCCTGTTTGAGTGTCAGTA Suillus_sinuspaulianus CAACTTTCAGCAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATC-GC-GATATGTAA-TGTGAATTGCAGAT-CTACAGTGAATCATCGAATCTTTGAACGCACCTTGCG-CT----TC--TCGG-TGTTCC-GAGGAGCATGCCTGTTTGAGTGTCAGTA Chroogomphus_vinicolor CAACTTTCAGCAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATT-GC-GATATGTAA-TGTGAATTGCAGAT-CTACAGTGAATCATCGAATCTTTGAACGCACATTGCG-CT----CC--TCGG-TGTTCC-GAGGAGCATGCCTGTTTGAGTGTCAGTA Gomphidius_glutinosus CAACTTTCAGCAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATT-GC-GATATGTAA-TGTGAATTGCAGAT-CTACAGTGAATCATCGAATCTTTGAACGCACATTGCG-CT----CC--TCGG-TGTTCC-GAGGAGCATGCCTGTTTGAGTGTCAGTA Truncocolumella_citrina CAACTTTCAGCAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATC-GC-GATATGTAA-TGTGAATTGCAGAT-CTACAGTGAATCATCGAATCTTTGAACGCACCTTGCG-CT----CC--TCGG-TGTTCC-GAGGAGCATGCCTGTTTGAGCGTCAGTA Tricholoma_matsutake CAACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACCTTGCG-CT----CC--TTGG-TATTCC-GAGGAGCATGCCTGTTTGAGTGTCATGA Cryptococcus_neoformans AAACTTTCAACAACGGATC-TCTTGGCTTCCACATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAGTCTTTGAACGCAACTTGCG-CC----CT--TTGG-TATTCC-GAAGGGCATGCCTGTTTGAGAGTCATGA [Ascomycota] Aspergillus_niger AAACTTTCAACAATGGATC-TCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAACTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAGTCTTTGAACGCACATTGCG-CC----CC--CTGG-TATTCC-GGGGGGCATGCCTGTCCGAGCGTCATTG Saccharomyces_cerevisiae AAACTTTCAACAACGGATC-TCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATACGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--TTGG-TATTCC-AGGGGGCATGCCTGTTTGAGCGTCATTT Morchella_esculenta AAACTTTCAACAACGGATC-TCTTGGTTCCCACATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CT--CTGG-TATTCC-GGAGGGCATGCCTGTTCGAGCGTCATAA Candida_albicans AAACTTTCAACAACGGATC-TCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAAT-GCCGATACGTAA-TATGAATTGCAGAT-AT-CCGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CT--CTGG-TATTCC-GGAGGGCATGCCTGTTTGAGCGTCGTTT Neurospora_crassa AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAGGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CT----CG--CCAG-TATTCT-GGCGAGCATGCCTGTTCGAGCGTCATTT Ascosphaera_apis AAACTTTCAACAACGGATC-TCTTGGTTCCGACATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CT--CTGG-TATTCC-GGGGGGCATGCCTGTCCGAGCGTCATTG Beauveria_bassiana AAACTTTCAACAACGGATCGTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TC-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CG--CCAG-CATTCT-GGCGGGCATGCCTGTTCGAGCGTCATTT Hypocrea_schweinitzii AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CG--CCAG-TATTCT-GGCGGGCATGCCTGTCCGAGCGTCATTT Claviceps_purpurea AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATACGTAA-TGTGAATTGCAGAC-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CG--CCAG-TATTCT-GGCGGGCATGCCTGTTCGAGCGTCATTT Ceratocystis_douglasii AAACTTTCAACAACGGATC-TCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAAT-GC-GATACGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----TG--GCAG-TATTCT-GCCAGGCATGCCTGTCCGAGCGTCATTT Chalara_australis AAACTTTCAACAACGGATC-TCTTGGCTCTAGCATCGATGAAGAACGCAGCGAAAT-GC-GATACGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----TG--GCAG-TATTCT-GCCAGGCATGCCTGTCCGAGCGTCATTT Ophiostoma_ulmi AAACTTTCAACAACGGATC-TCTTGGCTCTGGCATCGATGAAGAACGCAGCAAAAT-GC-GATACGTAA-TGCGAATTGCAGAA-TT-CAG-GAGTCATCGAATCTTTGAACGCACATTGGG-CC----CG--CCAG-TATTCT-GGCGGGCATGCCTGTCCGAGCGTCATTT Fusarium_subglutinans AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCAAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CG--CCAG-TATTCT-GGCGGGCATGCCTGTTCGAGCGTCATTT Gaeumannomyces_cylindrosporus AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CG--CCGG-TATTCC-GGCGGGCATGCCTGTTCGAGCGTCATTT Leptosphaeria_maculans CAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAG-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--TTGG-TATTCC-ATGGGGCATGCCTGTTCGAGCGTCATTT Penicillium_marneffei AAACTTTCAACAATGGATC-TCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--CTGG-CATTCC-GGGGGGCATGCCTGTCCGAGCGTCATTT Eupenicillium_javanicum AAACTTTCAACAACGGATC-TCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAGTCTTTGAACGCACATTGCG-CC----CC--CTGG-TATTCC-GGGGGGCATGCCTGTCCGAGCGTCATTG Phialophora_graminicola AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CG--CCGG-TATTCC-GGCGGGCATGCCTGTTCGAGCGTCATTT Phoma_wasabiae CAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAG-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--TTGG-TATTCC-ATGGGGCATGCCTGTTCGAGCGTCATTT Sclerotinia_sclerotiorum AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--TTGG-TATTCC-GGGGGGCATGCCTGTTCGAGCGTCATTT Morchella_conica AAACTTTCAACAACGGATC-TCTTGGTTCCCACATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--CTGG-TATTCC-GGGGGGCATGCCTGTTCGAGCGTCATAA Rutstroemia_firma AAACTTTCAACAACGGATC-TCTTGGTTCTGG-ATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--TTGG-CATTCC-GGGGGGCATGCCTGTTCGAGCGTCATTT Gremmeniella_abietina AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--TTGG-TATTCC-GGGGGGCATGCCTGTTCGAGCGTCATTT Uncinula_adunca AAACTTTCAACAACGGATC-TCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-TAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--TTGG-CATTCC-GAGGGGCATGCCTGTTCGAGCGTCATAA Sphaerotheca_cucurbitae AAACTTTCAACAACGGATC-TCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-TAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--CCGG-CATTCC-GAGGGGCATGCCTGTTCGAGCGTCAGAA Phyllactinia_moricula AAACTTTCAACAACGGATC-TCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TC-TAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--TTGG-TATTCC-GAGGGGSATGCCTGTTCGAGCGTCAAAA Pleochaeta_shiraiana AAACTTTCAACAACGGATC-TCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-TAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--TTGG-CATTCC-GAGGGGCATGCCTGTTCGAGCGTCATAA Drechslera_avenae CAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAG-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CT--TTGG-TATTCC-AAAGGGCATGCCTGTTCGAGCGTCATTT Bipolaris_oryzae CAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATACGTAG-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CT--TTGG-TATTCC-AAAGGGCATGCCTGTTCGAGCGTCATTT Nectria_vilior AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CG--CCAG-TATTCT-GGCGGGCATGCCTGTTCGAGCGTCATTT Neocosma_vasinfecta AAACTTTCAACAACGGATC-TCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CG--CCAG-TATTCT-GGCGGGCATGCCTGTTCGAGCGTCATTA Colletotrichum_acutatum AAACTTTTAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CG--CCAG-CATTCT-GGCGAGCATGCCTGTTCGAGCGTCATT? Glomerella_cingulata AAACTTTTAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CG--CCAG-CATTCCTGGCGGGCATGCCTGTTCGAGCGTCATT? Trichoderma_reesei AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCGTCGAATCTTTGAACGCACATTGCG-CC----CG--CCAG-TATTCT-GGCGGGCATGCCTGTCCGAGCGTCATT? Acremonium_strictum AAACTTTCAACAACGGATC-TCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CG--CCGG-CACTCC-GGCGGGCATGCCTGTCCGAGCGTCATTT Acremonium_chrysogenum AAACTTTCAGCAACGGATC-TCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CG--CCAG-CACTCT-GGCGGGCATGCCTGTCCGAGCGTCATTT Alternaria_alternata AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAG-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CT--TTGG-TATTCC-AAAGGGCATGCCTGTTCGAGCGTCATTT Monascus_purpureaus AAACTTTCAACAACGGATC-TCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--CTGG-TATTCC-GGGGGGCATGCCTGTCCGAGCGTCATTA Aspergillus_ustus AAACTTTCAACAATGGATC-TCTTGGTTCCGGCATCGATGAAGAACGCAGCGAACT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAGTCTTTGAACGCACATTGCG-CC----CC--CTGG-CATTCC-GGGGGGCATGCCTGTCCGAGCGTCATTG Candida_stellatoidea AAACTTTCAACAACGGATC-TCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATACGTAA-TATGAATTGCAGAT-AT-TCGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CT--CTGG-TATTCC-GGAGGGCATGCCTGTTTGAGCGTCGTTT Holleya_sinecauda AAACTTTCAACAACGGATC-TCTTGGTTCTCGCATCGATGAAGAACGCAGCGAATT-GC-GATAAGTAT-TGTGAATTGCAGAT-TT-TCGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CT--CTGG-TATTCC-AGAGGGCATGCCTGTTTGAGCGTCATTT Kluyveromyces_aestuarii AAACTTTCAACAACGGATC-TCTTGGTTCTCGCATCGATGAAGAACGCAGCGAATT-GC-GATAAGTAT-TGTGAATTGCAGAT-TT-TCGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CT--TTGG-TATTCC-AGGGGGCATGCCTGTTTGAGCGTCATTT Eremothecium_ashbyi AAACTTTCAACAACGGATC-TCTTGGTTCTCGCATCGATGAAGAACGCAGCGAATT-GC-GATAAGTAT-TGTGAATTGCAGAT-TT-TCGTGAATCATCGAATCTTTGAACGCACATTGCG-TC----CT--CTGG-TATTCC-AGAGGGCATGCCTGTTTGAGCGTCATTT Ashbya_gossypii AAACTTTCAACAACGGATC-TCTTGGTTCTCGCATCGATGAAGAACGCAGCGAATT-GC-GATAAGTAT-TGTGAATTGCAGAT-TT-TCGTGAATCATCGAATCTTTGAACGCACATTGCG-TC----CT--CTGG-TATTCC-AGGGGGCATGCCTGTTTGAGCGTCATTT Nematospora_coryli AAACTTTCAACAACGGATC-TCTTGGTTCTCGCATCGATGAAGAACGCAGCGAATT-GC-GATAAGTAT-TGTGAATTGCAGAT-TT-TCGTGAATCATCGAATCTTTGAACGCATATTGCG-CC----CA--CTGG-TATTCC-GGTGGGCATGCCTGTTTGAGCGTCATTT Thermomyces_lanuginosis AAACTTTCAACAATGGATC-TCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CT--CTGG-TATTCC-GGGGGGCATGCCTGTCCGAGCGTCATT? [Glomus core group] Glomus_dimorphicum TCACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAG-TGTGAATTGCATAA-TT-TTGTGAATCATCGAATCTTTGAACGCAAATTGCA-CT----CC--CTGG-TATTCC-GGGGAGTATGCCTGTTTGAGGGTCGTTA Glomus_mosseae TCACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAG-TGTGAATTGCATAA-TT-TTGTGAATCATCGAATCTTTGAACGCAAATTGCA-CT----CC--CTGG-TATTCC-GGGGAGTATGCCTGTTTGAGGGTCGTTA Glomus_coronatum TCACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAG-TGTGAATTGCATAA-TT-TTGTGAATCATCGAATCTTTGAACGCAAATTGCA-CT----CT--CTGG-TATTCC-GGGGAGTATGCCTGTTTGAGGGTCGTTA Glomus_clarum_4.8 TCACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATAAAAAACGTAGCGAAGT-GC-GATaAGTAA-TGTGAATTGCAgAA-TT-CCGTGAATCATCGAATCTTTGAACGCAAATtGCA-CT----CT--CTGG-CATTCC-GGAAAGTATGCCTGTTTGAGGGTCAGTA Glomus_clarum_4.9 TCACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGAtGAAGAACGTAGCGAAGt-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATcGAATCTTTGAACGCAAATTGCA-CT----CT--CTGG-CATTCC-GGAGAGTATGCCTGTTTGAGGGTCAGTA Glomus_geosporum TCACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATGAAgAACGCAGCGAAAT-GC-GATAAGTAG-TGTGAATTGCAGAAATT---GTGAATCATCGAATCTTTGAACGCAAATTGCA-CT----CT--CTGG-TATTCC-GGGGAgTATGCCTGTTTGAGGGTCGTTA Glomus_intraradices ACACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAGT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCGAATCTTTGAACGCAAATTGCA-CT----CT--CT-----TT---GGAGAGTATGCCTGTTTGAGGGTCAGTA [Gl.etunicatum group] Glomus_etunicatum_ITH caactttcaacaacggatc-tcttggctctcgcatcgatgaagaacgcagcgaatt-gc-gataagtaa-tgtgaattgcagaa-tt-acgtgaatcatcgaatctttgaacgcatattgca-ct----ct--ctgg-taatcc-ggggagtatgcctgtttgagggtcagta Glomus_etunicatum_UT316 CAACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATgAAAAACGCAGCGAATT-GC-GATAAGTaA-TGTGAATTGCAAAA-TT-ACGTGAATCATCGAATCTTTGAACGCATaTTGCA-CT----CT--CTGG-TAATCC-GGGGAgTaTGCCTGTTTgAgGGTCAGTA Glomus_spec_S329_2 CAACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATrAArAACGCAGCGAAtT-GC-GATaAGTaA-TGTGAATTGCAgAA-TT-ACGTGAATCATCGAATCTTTGAACGCATATTGCA-CT----CT--CTGG-TAATCC-GGGGAGTATGCCTGTTTGAGGGTCAGTA Glomus_claroideum CAACTTTCAACAACGGATC-TCTTGGCTCTCGCACCGATGAAGAACGCAGCGAATTTGC-GATAAGTAA-TGTGAATTGCAGAA-TT-GCGTGAATCATCGAATCTTTGAACGCATATTGCA-CT----CT--CTGG-TAATCC-GAGGAGTATGCCTGTTTGAGGGTCAGTA [Acaulosporaceae s.str.] Entrophospora_colombiana CAACTTTCAACAACGGATC-TCTTGGCTCTTGCATCGaTGAAGAACGCAGTGAAAT-GC-GATAGGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCAAATCTTTGAACGCAAATtGCG-CT----CC--TTGG-tATTCC-GAGGAGCATGCTTGCTTGAGTGTTAGTC Acaulospora_morrowiae CAACTTTCAACAACGGATC-TCTTGGCTCTTGCATCGATGAAGAACGCAGCGAAAT-AC-GAAAAGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCAAATCTTTGAACGCAAATTGCA-CT----CT--TTGG-TATTCC-GAAgAGTATGCTTGCTTGAGGGTTGTTT Acaulospora_mellea TAACTTTCAACAACGGATC-TCTTGGCTCTTGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGaATTGCAGAA-TT-CCgtGAATCATCAAATCTTTGAACGCAAATTGCA-CT----CT--TTGG-TATTCC-GAAGAGTAtgCTTGCTTGAGGGTtGTTC Acaulospora_laevis CAACTTTCAACAACGGATC-TCTTGGCTCTtGCATCGatGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAAtTGCAGAA-TT-CCGTGAATCATCAAATCTTTGAACGCAAATTGCA-CT----CT--TTGG-TATTCC-GAAGAGtAtGCTTGCTTGAGGGTTGGAT Acaulospora_denticulata CAACTTTCAACaACGGATc-TCTTGGCTCTTGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCAAATCTTTGAACGCAAATTGCA-CT----CT--TTGG-TATTCC-GAGGAGTATGCTTGTttGAGGGTTGTTC [Gigasporaceae] Gigaspora_margarita_GIM4 AAACTTTCAACAATGGATC-TCTTGGCTCTCACATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TATGAATTGCAGAA-TT-CCGTGAATCATCAAATTTTTGAACGCAAATTGCA-CT----TC--TTGG-TATTCC-GAGGAGTACACATGCTTGAGGGTCAGTT Gigaspora_margarita_GIM3 AAACTTTCAACAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TATGAATTGCAGAA-TT-CCGTGAATCATCAAATTTTTGAACGCAAATTGCA-CT----TC--TTGG-TATTCC-GAGGAGTACACATGCTTGAGGGTCAGTT Gigaspora_margarita_GIM2 AAACTTTCAACAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TATGAATTGCAGAA-TT-CCGTGAATCATCAAATCTTTGAACGCAAATTGCA-CT----TC--TTGG-TATTCC-GAGGAGTACACATGCTTGAGGGTCAGTT Gigaspora_margarita_GIM1 AAACTTTCAACAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGGAAT-GC-GATAAGTAA-TATGAATTGCAGAA-TT-CCGTGAATCATCAAATCTTTGAACGCAAATTGCA-CT----TC--TTGG-TATTCC-GAGGAGTACACATGCTTGAGGGTCAGTT Gigaspora_gigantea AAACTTTCAACAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TATGAATTGCAGAA-TT-CCGTGAATCATCAAATTTTTGAACGCAAATTGCA-CT----TC--TTGG-TATTCT-GAGAAGTACACATGCTTGAGGGTCAGTT Gigaspora_decipiens AAACTTTCAACAATGGATC-TCTTGGCTCTCGCATCGATgAAAAACGCAGCAAAAT-GC-GATAAGTAA-TATGAATTGCAgAA-TT-CCGTGAATCATCAAATTTTTGAACGCAAATTGCA-CT----TC--TTGG-TATTCC-GAGGAgTACACATGCTTGAGGGTCAGTT Gigaspora_albida AAACTTTCAACAATGGATC-TCTTGGCTCTTGCATCGATGAAAAACGCGGCGAAAT-GC-GATAAGTAA-TATGAATTGCAGAA-TT-CCGTGAATCATCAAATTTTTGAACGCAAATTGCA-CT----TT--TTGG-TATTCT-GAGAAGTACACATGCTTGAGGGTCAGTT Scutellospora_heterogama_3 AAACTTTCAACAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAGGTAA-TATGAATTGCAGAA-TT-CCGTGAATCATCAAATTTTTGAACGCAAATTGCA-CT----TC--TTGG-TATTCT-GAGGAGTACACATGCTTGAGGGTCAGTT Scutellospora_pellucida AAACtttcAACAATGGATC-TCTTGGTTCTCGCATCGATGAAGAACGCAGCGaAAT-Gc-GATAAGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCAAATTTTTGAACGCAAATTGCA-CT----CC--TTGG-TATTCC-GAGGAGTACACcTGCTTGAAGGTCAGTT Scutellospora_castanea aaactttcaacaatggatc-tcttggctctcgcatcgatgaagaacgcagcgaaat-gc-gataagtaa-tgtgaattgcagaa-tt-ccgcgaatcatcaaatttttgagcgcaaattgca-ct----tc--ttgg-tattcc-aagaagtacacctgcttgagggtcagtt T6 AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCAAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAACCTTTGAACGCACATTGCG-CC----GC--TGG--TATTC--GGCGGGCATGCCTGTTCGAGCGTCATTT T5 AAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCAAAAT-GC-GATGAGTAA-AGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CCC---GC--CAG--TATTCT-GGCGGGCATGCCTGTTCGAGCGTCATTT T4 AAACTTTCAACAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GCGGATAAGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCAAATTTTTGAACGCAAATTGCA-CT----TC--TTGG-TATTCC-AAGAAGTACACCTGCTTGAGGGTCAGTT T3 CAACTTTCAACAGCGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAG-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--TTGG-TATTCC-ATGGGGCATGCCTGTTCGAGCGTCATTT T2 AAACTTTCAACAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCAAATTTTTGAACGCAAATTGCA-CT----TT--TCGG-TATTCC-GAGAAGTACACCTGCTTGAGGGTCAGTT T1 CAACTTTCAACAACGGATC-TCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAG-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----CC--TTGG-TATTCC-ATGGGGCATGCCTGTTCGAGCGTCATTT ITSC1 AAACTTTCAACAACGGATC-TCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAAGTGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCACATTGCG-CC----TC--CTGG-TATTCC-GGGAGGCATGCCTGTCCGAGCGTCATCA ITSC3 AAACTTTCAACAATGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAA-TGTGAATTGCAGAA-TT-CCGTGAATCATCAAATTTTTGAACGCAAATTGCA-CT----TC--TTGG-TATTCC-AAGAAGTACACCTGCTTGAGGGTCAGTT [trappei/gerdemannii] Acaulospora_trappei_AU219 AAACTTTCAACAACGGATC-TCTTGGCTCTTGCATCGATGAAGAACGCAGCGAATT-GC-GATAAGTAG-TGTGAATTGCAGAA-TT-CCGTGAATCATCGAATCTTTGAACGCATATTGCA-CT----CT--TTGG-TATTCC-GAAGAGTATGCCTGTTTGAGGGTCATTT Acaulospora_gerdemannii AAACTTTCAACAATGGATC-TCTTGGCTCTTGCATCGATGAAgAACGCAGTGAAGT-GC-GATATGTAG-TGTGAATTGCAGAA-TT-CCGTGAATCATCGAATCTTTGAACGCATATTGCA-CT----CT--CTGG-TATTCC-GGAgAgTaTGCCTGTTTGAGGATCattt [Gl.occultum group] Glomus_occultum_GR aaactttcaacaacggatc-tcttggctctcgcatcgatgaagaacgcagcgaaat-gc-gataagtag-tgtgaattgcagaa-ct-ttgtgaaccatcgaatctttgaacgcaaaytgcg-cc----tt--ct-----ytc--ggaaggcatgtctgtttgaggg-cacca Glomus_occultum_IA aaactttcaacaacggatc-tcttggctytcgcatcgatgaagaacgcagcgaaat-gc-gataagtag-tgtgaattgcagaa-ct-ttgtgaaccatcgaatctttgaacgcaaattgcg-cc----tt--tt------tc--ggaaggcatgtctgtttgaggg-cacca Glomus_brasilianum AAACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAg-TGTGAATTGCAGAA-CT-TTGTGAACCATCGAATCTTTGAACGCAAATTGCG-CC----TT--CT-----TTC--GGAAGGCATGTCTGTTTGAGGG-CACCA Glomus_occultum_HA770 AAACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATAAGTAG-TGTGAATTGCAGAA-CT-TTGTGAACCATCGAATCTTTGAACGCAAATTGCG-CC----TT--TT------TC--GGAAGGCATGTCTGTTTGAGGG-CACCA [other Zygomycetes] Endogone_pisiformis1 CAACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATACGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCATATTGCA-CT----CT--CTGG-TACTCC-GGGGAGTATGCCTGTTTCAGTATCATTA Endogone_pisiformis2 CAACTTTCAACAACGGATC-ACTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATACGTAA-TGTGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCATATTGCA-CT----CT--CTGG-TACTCC-GGGGAGTATGCCTGTTTCAGTATCATTA Endogone_pisiformis3 CAACTTTCAACAACGGATC-TCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAT-GC-GATACGTAA-TGGGAATTGCAGAA-TT-CAGTGAATCATCGAATCTTTGAACGCATATTGCA-CT----CT--CTGG-TACTCC-GGGGAGTATGCCTGTTTCAGTATCATTA [plants] Phaseolus_vulgaris TGACTCTCGGCAACGGATA-TCTCGGCTCTTGCATCGATGAAGAACGTAGCGAAAT-GC-GATACTTGG-TGTGAATTGCAGAA-TC-CCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAGCCATTAGG-----CC--GAGGGCAAGCCTGCCTGGGTGTCACAC Pinus_contorta CGACTCTCGTCAACGGATA-TCTCGGCTCTTGTTACGATGAAGAACGTANCGAAAT-GC-GATACTTAG-TGTGAATTGCAGAA-TC-CCGTGAATCATCGAGTTTTTGAACGCAATTTGCGCCCGAGGCC--TCGG-----TC--GAGGGCACGTCTGTCTGGGCGTCGCAT Oryza_sativa CGACTCTCGGCAACGGATA-TCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAAT-GC-GATACCTGG-TGTGAATTGCAGAA-TC-CCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCCATCCGG-----CC--GAGGGCACGCCTGCCTGGGCGTCACGC Isoetes_histrix TACGACTCGGCAACGGATA-TCTTGGCTCTTGCCACGATGAAGAACGCAGCGAAAT-GC-GATACGTGA-TGTGAATTGCAGAA-CT-CCGTGAATCATTGAATCTTTGAACGCAACTTGCGCCCGGGGCT---TGT-----CC--GAGGGCATGTCTGCGTGAGCGTCTAAC Selaginella_denticulata AACGACTCGGCAACGGATA-TCTTGGCTCTTGCAACGATGAAGAACGCAGCGAAAT-GT-GATACGTGA-TGTGAATTGCAGAA-TT-CCGTGAATCATCAAATGTTTGAACGCAACTTGCGCCCGAGGCT---TGT-----CC--GAGGGCATGCCTGCTTGAGCGTCTGCT ; endblock; begin assumptions; [weight transversions:transitions 2:1] usertype weight stepmatrix=4 ATGC . 2 1 2 2 . 2 1 1 2 . 2 2 1 2 .; endblock; begin paup; delete Phaseolus_vulgaris Pinus_contorta Oryza_sativa Isoetes_histrix Selaginella_denticulata; outgroup Endogone_pisiformis1 Endogone_pisiformis2 Endogone_pisiformis3 end;